Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848601.1_cds_XP_016510471.1_23306
CDS Infomation

[gene=LOC107827784] [db_xref=GeneID:107827784] [protein=transcription factor LHW-like] [protein_id=XP_016510471.1] [location=join(182938..183032,184245..184445,184555..184636,184997..185038,185120..185179,185486..187087,187228..187329,187637..187777,187899..188024,188138..188317)] [gbkey=CDS]
Sequence

ATGGGGTATTTGTTGAAAGAGGTTTTGAAGACACTTTGTGGAGTGAACCAATGGTCTTAT
GCTGTTTTTTGGAAGATCGGTTGCCAGAATACTAAGCTTTTAATTTGGGAAGAATCCTAT
TATCAACCCTTAACATTCTCTGGAATTCTTGGAATATCTGAAATTGAGAATACTGAACTA
TCATTCCAAGATTGGGGTGTTTGTAATTCTCAGCTTATGAATCAGGCAGGGGAGAGAGTG
CATTTACTCGTAAACAAAATGATGACGGAAAGTCAATTCAATCTAGTAGGAGAAGGACTA
GTCGGTCGGGCTGCAGTTACTGGGAATCATCAGTGGTTTCATTCAGATGGTTTTAGTAGA
GTAGCTCATCCACCAGAGGTACTGAAAGAGCTGACTCAACAATTTAATGCTGGCATCAAG
ACAATTGCAGTTGTTCCTATTCTTCCTCATGGTGTTGTCCAATTTGGATCATGCTCACAT
ATAATGGAGAATATGGGTTTTGTGGAGGACGCGAGGATGCTGATAAGTCAACTAGGATGT
GTTCCTGGTGTCTTGTTATCCGATGAAAATGCAATGAAAGATCCTGCAGTTAACACTGCA
CCAGTTTCTCTAGATTCTTATGGGAGAGCCAAATCGATGAACTCCACTCCAATTATTGCT
AGCTGCAGTTATCAGAGTAACTCAAGTCAGACTGACAGTTTCGTTGGTCAAACTTCCTCT
CTGGCTTCACAAGTTCAGAATAGAATCCTGTCTACTGATGCAACATTTCGAGCCCCCAAT
ATGTCCCAAAGTTTTGTTGATTCTCATGATCGTCAGTTTCACAAAATTGTTCCAGAGGTG
AAAGCAAACCTGTCTCCTAATTGCCACCTAATAAATAATGTGATTAAAGCAGAGGTAATT
TCTCCAGACTCCAACATATGGACGAGTCAACAAGCTTCTTTGCACATTCTGAGGCCTCCC
TTTCATCAGCATTCTATTGATTCATTAACTGTAGATAGTGGCAGCTTAAGGTTGTTTGAA
CAGGGGATCACTTCAAATGCTGGTAGCCATGATTTTGGCAAAATCAACTCTTGCACAAAG
TCTACTGGAAATGGGCTTCAAATCACTTCAAAATTGGACGCATCTTCTTCGTCTTATGTT
GGGAATGATGTGATTACCAATAATAATTCTGATGGTCAGAGTTCACAATTTATGTGGGAT
GAGAGTAACGGAATAGTAGAAAACGATTTGTTTCAAGCGCTCGGTATTATGCTAACACAG
AATGAGCACCCGTGTTCAAGCAAGTACATGCAAGAGGTTTATGGTGAAAAACATGAAAAC
ATGGAGCATAATGCTTTACTTGAAAATAACAAATATGAAGATTCCTGTGTCCAAGGTCAC
TCGGGGGATGACCTCTTTGATGTTCTGGGTACCGAATTAAAAAATAAACTACTTAATGAA
AGGAATAGTTATCAAAGTAACGGACCAGACTCGAACACAGAGGATTGGATTAAGAATAAC
TCTACTTCTACTTCCGTAATTAGTCAGTATGCTGCTTCTTCGACAATCAATCAAGGAATG
TCCGATAGTGGATCATTTTCTGCGGCTGGTTTTGAGCGTCTTTTGGATTCCATAGCATCC
AAGCCTTCCGCCAAGCAGAATTTGGATGATGATGTTTCTTGTCGGACAACAATAACGAAT
TTGAGTAGGTCCTCTGCTCCAAATGCTGTATCTTCCTACGGCCGAGCTGGTTTCTCTAGT
CAAATTCAAGGAGAGGTATTTGGCCAGCCCAAAACTCTTGCAAAATCAGGAGCAATGGTT
TCTCGTTCATTTAGATCTGAGTGCTCCAATGAAAACACAGGAGCCTATTCGCAGAGTAGT
TCAATTTATGGGTCACAAATTAGTTCATGGGTGGAACAGGGTCATGAGACAAAGCCAACT
AGCAGTGTTTCTACTGGATATTCTAAGAAGCCTGATGAGACGAGCAAAACCAGCCGCAAA
AGGCTTAAACCAGGAGAGAATCCTAGACCAAGGCCAAAAGACCGGCAAATGATCCAAGAT
CGTGTCAAAGAACTGCGAGAAATTGTTCCAAATGGGGCAAAGTGTAGCATTGATGCACTA
CTGGAACGCACAATCAAGCACATGCTTTTCTTGCAGAGTGTCACCAAACATGCTGACAAA
TTAAAGCAGACTGGAGAGTCAAAGATTATCAGCAAGGAAGGAGGACTGCTTTTAAAAGAT
AATTCTGAAGGTGGAGCAACATGGGCATATGAAGTTGGTTCGCAGTCTATGGTCTGCCCT
ATAATAGTTGAGGATCTGAATCAACCTCGTCAAATGCTTGTAGAGATGCTTTGCGAAGAA
CGAGGTCTGTTTCTGGAAATAGCTGACATAATAAGAGGATTGGGCTTGACAATCTTAAAA
GGGGTTATGGAAACGAGGAATGACAAAATATGGGCAAGGTTCGCCGTAGAGGCAAACAGA
GACGTGACGAGGATGGATATATTCATCTCACTTGTTCGCCTCTTGGAGCAAACATCTAAA
GGTGGAGCAGAATCTGCTAATGCTATCGACAATAATAACACAACGATGGTGCATTCATTT
CACCAAGCAGCTTCAATACCTGCAACAGGCAGACCATGTAATTTACAATGA

Peptide Sequence

PEP ID

XP_016510471.1
PEP Infomation

PREDICTED: transcription factor LHW-like [Nicotiana tabacum]
Sequence

MGYLLKEVLKTLCGVNQWSYAVFWKIGCQNTKLLIWEESYYQPLTFSGILGISEIENTEL
SFQDWGVCNSQLMNQAGERVHLLVNKMMTESQFNLVGEGLVGRAAVTGNHQWFHSDGFSR
VAHPPEVLKELTQQFNAGIKTIAVVPILPHGVVQFGSCSHIMENMGFVEDARMLISQLGC
VPGVLLSDENAMKDPAVNTAPVSLDSYGRAKSMNSTPIIASCSYQSNSSQTDSFVGQTSS
LASQVQNRILSTDATFRAPNMSQSFVDSHDRQFHKIVPEVKANLSPNCHLINNVIKAEVI
SPDSNIWTSQQASLHILRPPFHQHSIDSLTVDSGSLRLFEQGITSNAGSHDFGKINSCTK
STGNGLQITSKLDASSSSYVGNDVITNNNSDGQSSQFMWDESNGIVENDLFQALGIMLTQ
NEHPCSSKYMQEVYGEKHENMEHNALLENNKYEDSCVQGHSGDDLFDVLGTELKNKLLNE
RNSYQSNGPDSNTEDWIKNNSTSTSVISQYAASSTINQGMSDSGSFSAAGFERLLDSIAS
KPSAKQNLDDDVSCRTTITNLSRSSAPNAVSSYGRAGFSSQIQGEVFGQPKTLAKSGAMV
SRSFRSECSNENTGAYSQSSSIYGSQISSWVEQGHETKPTSSVSTGYSKKPDETSKTSRK
RLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADK
LKQTGESKIISKEGGLLLKDNSEGGATWAYEVGSQSMVCPIIVEDLNQPRQMLVEMLCEE
RGLFLEIADIIRGLGLTILKGVMETRNDKIWARFAVEANRDVTRMDIFISLVRLLEQTSK
GGAESANAIDNNNTTMVHSFHQAASIPATGRPCNLQ

Transcript Sequence

Gene sequence data has not been registered.